BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB009C04SP1|AL426001
(856 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig892 1669 0.0
>3x_Contig892
Length = 2300
Score = 1669 bits (840), Expect = 0.0
Identities = 851/855 (99%), Gaps = 1/855 (0%)
Strand = Plus / Minus
Query: 1 atcgttcaaatattcgttcaattcttcccatggaacaccaccttgtaccacaacatccaa 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1250 atcgttcaaatattcgttcaattcttcccatggaacaccaccttgtaccacaacatccaa 1191
Query: 61 atcctctttattcaattgaataatcttattcaaatattttgaaatatccaagacgacaca 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1190 atcctctttattcaattgaataatcttattcaaatattttgaaatatccaagacgacaca 1131
Query: 121 agaccctggtctagttggtaggaaatgcccttccaaagaggtaccacctgaaaatgggat 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1130 agaccctggtctagttggtaggaaatgcccttccaaagaggtaccacctgaaaatgggat 1071
Query: 181 cactgggatagagtatttgtgacagattttcaataatttggaaacatcttctgtgttgcg 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1070 cactgggatagagtatttgtgacagattttcaataatttggaaacatcttctgtgttgcg 1011
Query: 241 tggatacaaaacaatttctggtctttgattagcttcagcatgatgagagttgaaataggt 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1010 tggatacaaaacaatttctggtctttgattagcttcagcatgatgagagttgaaataggt 951
Query: 301 atccgaatgagcatccaaatcgtccttagccacagtgaagttttcaggatcgttttctaa 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 950 atccgaatgagcatccaaatcgtccttagccacagtgaagttttcaggatcgttttctaa 891
Query: 361 gacatctttcaattcaacaagagctttagcaaaagtttccttatcacagtactcgggaga 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 890 gacatctttcaattcaacaagagctttagcaaaagtttccttatcacagtactcgggaga 831
Query: 421 atcaaggtcttccaatctagcaatggacaaatcactcacggacttttccttctcgaactg 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 830 atcaaggtcttccaatctagcaatggacaaatcactcacggacttttccttctcgaactg 771
Query: 481 agagcctagagcatatgcmacaaacccaccaccaattaaagaaccaccaagaacgcttaa 540
|||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct: 770 agagcctagagcatatgcaacaaacccaccaccaattaaagaaccaccaagaacgcttaa 711
Query: 541 ratggcggacgaaaatccaccgccgttattaccgttagaagacgaataatgtctttttgc 600
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 710 aatggcggacgaaaatccaccgccgttattaccgttagaagacgaataatgtctttttgc 651
Query: 601 aacggcagtngntcctagaacgcagaacgtccttacgtagttgcagcgaaccacgcaaag 660
||||||||| | ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 650 aacggcagt-ggtcctagaacgcagaacgtccttacgtagttgcagcgaaccacgcaaag 592
Query: 661 caaaaccggatcttccaacaaacctgaacattgagttgcgtttctggtctttcttgcact 720
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 591 caaaaccggatcttccaacaaacctgaacattgagttgcgtttctggtctttcttgcact 532
Query: 721 ttgcgataacaagtacacaaaacagctgctaagttaccaagtttctctaccaagttgtta 780
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 531 ttgcgataacaagtacacaaaacagctgctaagttaccaagtttctctaccaagttgtta 472
Query: 781 ccttattatatagtatattgatatgcggaatacagacggcgttcgattatacatatatat 840
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 471 ccttattatatagtatattgatatgcggaatacagacggcgttcgattatacatatatat 412
Query: 841 atatatatatatata 855
|||||||||||||||
Sbjct: 411 atatatatatatata 397
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.38 0.711 1.31
Gapped
Lambda K H
1.38 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 13,747
Number of Sequences: 1807
Number of extensions: 13747
Number of successful extensions: 2791
Number of sequences better than 1.0e-20: 1
length of query: 856
length of database: 10,358,551
effective HSP length: 16
effective length of query: 840
effective length of database: 10,329,639
effective search space: 8676896760
effective search space used: 8676896760
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.8 bits)
S1: 12 (24.3 bits)
S2: 50 (99.8 bits)